com.tomesphere/tomesphere

up checked 2026-11-11T06:39:34.560Z

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Publisher-provided description

Search 8.5M scientific papers with LLM TLDRs, citations, linked entities, figures, and full text.

Summary by lookupd

Search millions of academic and biomedical papers, then read metadata, full text, figures, citations, and linked biomedical entities.

Install

Claude Code, remote (streamable-http)

claude mcp add --transport http tomesphere https://mcp.tomesphere.com/api/mcp

Codex, remote (streamable-http)

codex mcp add tomesphere --url https://mcp.tomesphere.com/api/mcp

Cursor, remote (streamable-http) → .cursor/mcp.json

{
  "mcpServers": {
    "tomesphere": {
      "url": "https://mcp.tomesphere.com/api/mcp"
    }
  }
}

Other clients: docs. Or tell your agent: Set up lookupd for me: read https://lookupd.com/agent.md and follow it.

Tools (9 tools)

Publisher-provided text

• search_papers Search 8.5 million academic papers (arXiv + biomedical: PMC / bioRxiv / medRxiv, all disciplines) by topic, keyword, author, or linked entity (gene / protein /
• get_paper Fetch a paper's full metadata: title, authors, year, abstract, TLDR (LLM-generated), key findings, citation count, GitHub repos, HuggingFace models/datasets, vi
• similar_papers Find papers semantically similar to a given paper using SPECTER2 embeddings (trained on scientific-citation triplets). Returns nearest neighbors with TLDR. Use
• citations Get papers that cite the given paper (who refers to this work). Use when the user asks 'who cites X', 'what's the impact', or wants follow-up work. Note: 2024+
• references Get the papers that this paper cites (its bibliography). Use when the user asks 'what does X cite' or 'show me the references'.
• get_full_text Fetch a paper's full body text as Markdown (methods, results, protocols, inline tables) — use for deep questions the abstract can't answer. Accepts an arXiv ID
• get_figures Get a paper's real figure images — URLs, labels, and captions. Most biomedical papers have figures; arXiv papers often don't. Accepts an arXiv ID, PMC ID, or bi
• get_entities Get the biomedical entities linked to a paper: genes, proteins, chemicals, diseases, species, mutations, cell lines, and clinical-trial (NCT) IDs. Accepts an ar
• get_structure Resolve a gene/protein name (e.g. 'TP53', 'CD44') or UniProt accession to its 3D structure — returns the UniProt accession + AlphaFold model URL (and PDB when a

Details

• Version: 0.1.0
• Transports: streamable-http
• Uptime (7 days): 100%
• Median latency: 260 ms
• First indexed: 2026-11-01T08:59:26.008Z
• Last seen in registry: 2026-11-01T08:59:26.008Z
• Website: https://tomesphere.com/mcp

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• 62092 servers
• Last crawl: 2026-11-11T17:38:11.606Z
• API base: https://api.lookupd.com
• MCP URL: https://api.lookupd.com/mcp