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io.github.K-Dense-AI/labmcp-ms-data

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Publisher-provided title

Mass Spectrometry Data (mzML, Bruker TDF, vendor conversion)

Publisher-provided description

MCP server for LC-MS data in mzML/mzMLb and Bruker timsTOF files; vendor formats via msconvert.

Summary by lookupd

Lets an agent read, parse, and convert mass spectrometry files such as mzML, mzMLb, and Bruker timsTOF data for analysis.

Install

Claude Code, pypi package (stdio)

claude mcp add labmcp-ms-data -- uvx labmcp-ms-data

Codex, pypi package (stdio)

codex mcp add labmcp-ms-data -- uvx labmcp-ms-data

Cursor, pypi package (stdio) → .cursor/mcp.json

{
  "mcpServers": {
    "labmcp-ms-data": {
      "command": "uvx",
      "args": [
        "labmcp-ms-data"
      ]
    }
  }
}

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