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io.github.cytoscape/cytoscape-desktop-mcp-bridge

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Publisher-provided title

Cytoscape Desktop MCP

Publisher-provided description

Drive a running Cytoscape Desktop to load, lay out, and style biological networks.

Summary by lookupd

Lets an agent load, lay out and style biological network graphs inside a running Cytoscape Desktop session.

Install

Claude Code, npm package (stdio)

claude mcp add cytoscape-desktop-mcp-bridge -- npx -y @cytoscape/cytoscape-desktop-mcp-bridge

Codex, npm package (stdio)

codex mcp add cytoscape-desktop-mcp-bridge -- npx -y @cytoscape/cytoscape-desktop-mcp-bridge

Cursor, npm package (stdio) → .cursor/mcp.json

{
  "mcpServers": {
    "cytoscape-desktop-mcp-bridge": {
      "command": "npx",
      "args": [
        "-y",
        "@cytoscape/cytoscape-desktop-mcp-bridge"
      ]
    }
  }
}

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