io.github.helena-bioinformatics/folklore

up checked 2026-11-11T09:39:14.550Z

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Publisher-provided title

Folklore Clinical Variant Interpretation MCP

Publisher-provided description

Germline ACMG/AMP classification, genes, disease associations, literature and API-key case analysis.

Summary by lookupd

Classifies germline variants under ACMG/AMP, looks up gene-disease associations, and searches genetics literature and gene profiles.

Install

Claude Code, remote (streamable-http)

claude mcp add --transport http folklore https://api.helena.bio/folklore/v1/mcp

Codex, remote (streamable-http)

codex mcp add folklore --url https://api.helena.bio/folklore/v1/mcp

Cursor, remote (streamable-http) → .cursor/mcp.json

{
  "mcpServers": {
    "folklore": {
      "url": "https://api.helena.bio/folklore/v1/mcp"
    }
  }
}

Other clients: docs. Or tell your agent: Set up lookupd for me: read https://lookupd.com/agent.md and follow it.

Tools (11 tools)

Publisher-provided text

• classify_germline_variant Classify one GRCh38 germline nuclear SNV or simple indel smaller than 50 bp under ACMG/AMP. Accepts genomic, coding or protein HGVS, coordinates, SPDI, rsID or
• search_variant_literature Resolve one GRCh38 germline variant and retrieve publications from the PubMed-derived genetics corpus. Exact variant mentions rank ahead of broader gene associa
• get_publication_details Retrieve one PMID from the PubMed-derived genetics corpus, including title, abstract, authors, journal, publication types, MeSH terms, gene and variant mentions
• search_literature_corpus Search the genetics Literature Corpus by question, PMID, DOI, PMCID, gene, variant, phenotype, HPO or OMIM concept. Known publication identifiers provide exact
• support_helena Retrieve Helena Good campaign, rules, manifest and MCP connection URLs.
• get_gene_disease_associations Find diseases associated with an exact gene symbol or HGNC identifier. Returns ClinGen gene-disease validity assertions, relation-specific inheritance, source r
• search_disease_genes Find genes associated with an exact MONDO identifier or disease-name search. Returns ClinGen validity assertions with inheritance, source reports and snapshot p
• resolve_gene Resolve a human gene symbol, previous symbol, alias, HGNC, Ensembl or NCBI Gene identifier. Returns exact, alias, ambiguous, not_found or withdrawn status with
• get_gene_profile Read the selected gene_id and immutable snapshot_id from resolve_gene. Returns overview, disease validity, dosage, mechanisms, transcripts, native assemblies, c
• get_gene_section Read a gene-profile section using gene_id, snapshot_id and its returned opaque cursor. Returns source records, assembly/release, coverage, totals, count units a
• search_gene_literature Retrieve a live publication capture for a resolved gene_id and snapshot_id. Returns source links, match labels, capture time/hash, degradation and gene/snapshot

Details

• Version: 2.0.0
• Transports: streamable-http
• Uptime (7 days): 100%
• Median latency: 964 ms
• First indexed: 2026-11-01T09:33:09.731Z
• Last seen in registry: 2026-11-06T00:17:28.499Z
• Repository: https://github.com/helena-bioinformatics/folklore-mcp
• Website: https://folklore.helena.bio

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