io.github.nhoverte/biocosm

up checked 2026-11-11T06:39:47.649Z

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Publisher-provided title

BioCosm

Publisher-provided description

Biotech intelligence for AI agents: drugs, targets, diagnostics, PoS estimates, and writeups.

Summary by lookupd

Lets an agent query biotech drug, target, and diagnostic data, including clinical phase, PoS estimates, and company portfolios.

Install

Claude Code, remote (streamable-http)

claude mcp add --transport http biocosm https://biocosm-mcp.fly.dev/mcp

Codex, remote (streamable-http)

codex mcp add biocosm --url https://biocosm-mcp.fly.dev/mcp

Cursor, remote (streamable-http) → .cursor/mcp.json

{
  "mcpServers": {
    "biocosm": {
      "url": "https://biocosm-mcp.fly.dev/mcp"
    }
  }
}

Other clients: docs. Or tell your agent: Set up lookupd for me: read https://lookupd.com/agent.md and follow it.

Tools (13 tools)

Publisher-provided text

• search_nodes Search BioCosm nodes by name, gene symbol, target, therapeutic area, or company. Results are ranked: exact name/brand matches first, then partial name matches,
• get_node Get full details for a single BioCosm node: identity and all name aliases, classification, gene targets and mechanism, therapeutic areas, companies, revenue his
• get_writeup Get the full writeup for a BioCosm node, including all sections, citations, structured data, and validation score.
• list_by_therapeutic_area List all nodes in a given therapeutic area.
• get_company_portfolio Get a company's full drug/diagnostic portfolio from BioCosm.
• get_stats Get a high-level overview of the BioCosm database: total nodes, writeups, companies, breakdowns by type/status/domain, validation scores, and recent pipeline ru
• get_staleness_report Get writeup staleness report: overall stats, top stale nodes, data source freshness.
• get_node_freshness Get freshness details for a single node: writeup age, enrichment hash match, staleness score, validation score.
• find_by_target Find all drugs that target a specific gene/protein.
• find_by_phase List drugs/diagnostics at a specific clinical phase.
• find_related Find nodes connected to a given node. Three relationship types are derived on-the-fly: - "drug_target": for a drug, the targets it hits (and vice versa for a
• get_pos_score Get the Probability of Success estimate for a node, including the base rate, adjustment factors with reasoning, confidence interval, and model version. Returns
• get_coverage Report BioCosm's actual data coverage so you never mistake missing data for a real-world zero. An empty or absent field on a node means "not in BioCosm's data,"

Details

• Version: 1.0.0
• Transports: streamable-http
• Uptime (7 days): 100%
• Median latency: 173 ms
• First indexed: 2026-11-01T09:42:56.879Z
• Last seen in registry: 2026-11-01T09:42:56.879Z
• Website: https://biocosm.io/mcp

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